Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820635.1_cds_XP_016500477.1_14300
CDS Infomation

[gene=LOC107818913] [db_xref=GeneID:107818913] [protein=scarecrow-like protein 30] [protein_id=XP_016500477.1] [location=51931..53838] [gbkey=CDS]
Sequence

ATGGAAGCCATATTCCAAGAACAACTTTTTCCTGGTGCAGATGCTTTCATTTTTAGGCAC
CCTTCTTCAAGAGAAGATGTTGTTGTACAAAATGGTAGTACAATATTCAATCGTCCTAGT
TTTGAAGATTACCCTTATGTCCTTTCAAATGTCCGAGAAGGAGATTCTTCTCCTAAAGAG
GAAGGGGAAGGAGAAAGGGACTATTCTGATGCAATGTACAAATACATAAGCCAGATGCTA
ATGGAAGAGGAAGATTTGGAGTATAAGCCCTGTATGTTCCGTGACTGTATGGCTCTCCAA
GCTGCTGAGAAATACTTCTCTGATGTCCTTCACGGATCCGAAAACATTACTATTTCCCCC
CAGTTTTCCGCCATTATTCCACAGGATAAGGTTTCCTCCTCTTGTCCTGATCTCAGCAAC
ACTTCATCTTATTCTATTGAGTCTCCTCAATCGGGTCTGAATTTTGAATCCCCTGTTTCA
GTGAAGAGTTTGCCTGATGTCTCTAATGGACTAAATCATGGCTCTAGTGGTTTGAGGGAA
AAGAAAAATCACCATCGACAAGATGATGACCACCAGAGGAGTAACAAACAGTTGGCCACA
TTTGCTGCTGATGAATCTGAACCATTGGAAATGTATGACAATGTGTTGTTGCTTTGTCCA
AATAATCCATGTGGTCCGCCTAATGAAGTTAAAAAACCAACCAAAGTTGGAAGGTCGAGA
TCAGGTGGTAAGAAGCATAGCAGCAGCAAGAAGGAAATTGTGGATTTGAGAGGTCTGTTG
ACTCAATGTGCACAGGCAATGTCAAGCTATGATACCCGAACAGCTAATGAGTTGCTATTG
CGGATAAGACAACACTCTTCATCCCACGGGGATGAGACAGAGAGGTTGGCTCATTATCTT
GCCAATGCCCTTGAAGCACGCCTGTCCGGCACAGGAACAGCATCATATACAGCGTTTGCG
TCCAGCAGGATATCAGCTGCTCACATTTTGAAAGCTTACAAGGCGTTTATCACGGCATGC
CCATTCAAGTTGATATCAAACATTTTTGCAAATAAGTATATCAAGAAGTTGATTACTGGA
GGAGCACCAAGGACGATACATATAATTGATTTTGGGATTTTATATGGTTTCCAGTGGCCT
TGTCTCATACAAAGTCTATCGGCCTTGAGGCATGGGGAACCTATAAAGCTCCGCATTACT
GGAGTCGAACTTCCCCAGCCTGGTTTCCGGCCAGCAGAGAGGGTTGAGGATACAGGGCGT
CGCCTAAAGAAGTACTGTGACAGATTTAATGTTCCTTTCGAATTTATTGCCATAGCGAAG
AAGTGGGAAAGCATCACGCTTGAAGAGCTTCAGATTGACAGGAATGACGTTCTGGTGGTT
AACAGTTTGTATAGACTAGGGAACATACCTGATGAGACAGTAGTACCAACCAGTCCAAGG
GATGTTGTCTTAGATTTGATCAGGAGGATCCGTCCTGATATGTTCATCCACGGAGTGGTG
AACGGGACTTACAACACTCCATTCTTTCTGACACGGTTCAGGGAGGCGCTTTTTCACTTC
TCTACTTTGTTTGATATGTTTGAGGCTACCCTGCCCCGTGAGGATGAGGACAGAAAGCTT
TTCGAGGAAGAGGTTTTTGCAAGAGATGCTATGAACGTGATTGCTTGTGAAGGAACAGAG
AGGGTCGAGAGACCTGAAACGTACAAGCAGTGGCAACTTAGATGCGCGAGAGCTGGATTT
AGACAGCTGCCACTTGACCAGGAGATTGTCAACTTTGTCAGCAACAAAGTGAGGCGGGAG
TACCACAAGGACTTCTCAGTGGATGAAGATAGCCAGTGGATGCTGCAAGGATGGAAAGGA
CGTGTAGTTTACGCTCTCTCTTGTTGGAAGCCTGCTCAGCAATCGTAA

Peptide Sequence

PEP ID

XP_016500477.1
PEP Infomation

PREDICTED: scarecrow-like protein 30 [Nicotiana tabacum]
Sequence

MEAIFQEQLFPGADAFIFRHPSSREDVVVQNGSTIFNRPSFEDYPYVLSNVREGDSSPKE
EGEGERDYSDAMYKYISQMLMEEEDLEYKPCMFRDCMALQAAEKYFSDVLHGSENITISP
QFSAIIPQDKVSSSCPDLSNTSSYSIESPQSGLNFESPVSVKSLPDVSNGLNHGSSGLRE
KKNHHRQDDDHQRSNKQLATFAADESEPLEMYDNVLLLCPNNPCGPPNEVKKPTKVGRSR
SGGKKHSSSKKEIVDLRGLLTQCAQAMSSYDTRTANELLLRIRQHSSSHGDETERLAHYL
ANALEARLSGTGTASYTAFASSRISAAHILKAYKAFITACPFKLISNIFANKYIKKLITG
GAPRTIHIIDFGILYGFQWPCLIQSLSALRHGEPIKLRITGVELPQPGFRPAERVEDTGR
RLKKYCDRFNVPFEFIAIAKKWESITLEELQIDRNDVLVVNSLYRLGNIPDETVVPTSPR
DVVLDLIRRIRPDMFIHGVVNGTYNTPFFLTRFREALFHFSTLFDMFEATLPREDEDRKL
FEEEVFARDAMNVIACEGTERVERPETYKQWQLRCARAGFRQLPLDQEIVNFVSNKVRRE
YHKDFSVDEDSQWMLQGWKGRVVYALSCWKPAQQS

Transcript Sequence

Gene sequence data has not been registered.